Friday, 17 November 2017

Publications - 2014

2014

Siu GE, Wight D, Seeley JA. Masculinity, social context and HIV testing: an ethnographic study of men in Busia district, rural eastern Uganda. BMC Public Health. 2014; 14(1): 33.

Prentice HA, Price MA, Porter TR, Cormier E, Mugavero MJ, Kamali A, et al. Dynamics of viremia in primary HIV-1 infection in Africans: Insights from analyses of host and viral correlates. Virology. 2014; 449: 254-62.

Lloyd-Sherlock P, Ebrahim S, Grosskurth H. Is hypertension the new HIV epidemic? International Journal of Epidemiology. 2014.

Slone JS, Chunda-Liyoka C, Perez M, Mutalima N, Newton R, et al. (2014) Pediatric Malignancies, Treatment Outcomes and Abandonment of Pediatric Cancer Treatment in Zambia. PLoS ONE 9(2): e89102. doi:10.1371/journal.pone.0089102

Chantler T, Cheah PY, Miiro G, Hantrakum V, Nanvubya A, Ayuo E, et al. International health research monitoring: exploring a scientific and a cooperative approach using participatory action research. BMJ Open. 2014; 4(2).

Lees S, Zalwango F, Andrew B, Vandepitte J, Seeley J, Hayes RJ, et al. Understanding motives for intravaginal practices amongst Tanzanian and Ugandan women at high risk of HIV infection: The embodiment of social and cultural norms and well-being. Social Science & Medicine. 2014; 102: 165-73  .

Kirenga BJ, Levin J, Ayakaka I, Worodria W, Reilly N, Mumbowa F, et al. Treatment Outcomes of New Tuberculosis Patients Hospitalized in Kampala, Uganda: A Prospective Cohort Study. PloS One. 2014; 9(3): e90614.

Woodd SL, Grosskurth H, Levin J, Amuron B, Namara G, Birunghi J, et al. Home-based versus clinic-based care for patients starting antiretroviral therapy with low CD4(+) cell counts: findings from a cluster-randomized trial. AIDS. 2014; 28(4): 569-76. doi: 10.1097/QAD.0000000000000056

Shafer LA, Nsubuga RN, Chapman R, O'Brien K, Mayanja BN, White RG. The dual impact of antiretroviral therapy and sexual behaviour changes on HIV epidemiologic trends in Uganda: a modelling study. Sexually Transmitted Infections. 2014: sextrans-2013-051219

Vandepitte J, Hughes P, Matovu G, Bukenya J, Grosskurth H, Lewis DA. High prevalence of ciprofloxacin-resistant gonorrhea among female sex workers in kampala, Uganda (2008-2009). Sexually Transmitted Diseases. 2014; 41(4): 233-7. doi: 10.1097/OLQ.0000000000000099.

Murphy GA, Asiki G, Nsubuga RN, Young EH, Seeley J, Sandhu MS, et al. The use of anthropometric measures for cardiometabolic risk identification in a rural African population. Diabetes Care. 2014; 37(4): e64-5. doi: 10.2337/dc13-096.

Slone JS, Chunda-Liyoka C, Perez M, Mutalima N, Newton R, Chintu C, et al. Pediatric malignancies, treatment outcomes and abandonment of Pediatric cancer treatment in Zambia. PLoS One. 2014; 9(2): e89102. doi: 10.1371/journal.pone.0089102. eCollection 2014.

Asiki G, Seeley J, Srey C, Baisley K, Lightfoot T, Archileo K, et al. A pilot study to evaluate aflatoxin exposure in a rural Ugandan population. Tropical  Medicine International Health. 2014; 24(10): 12283.

Vandepitte J, Weiss HA, Bukenya J, Kyakuwa N, Muller E, Buvé A, et al. Association between Mycoplasma genitalium infection and HIV acquisition among female sex workers in Uganda: evidence from a nested case–control study. Sexually transmitted infections. 2014:sextrans-2013-051467.

Johnston WT, Mutalima N, Sun D, Emmanuel B, Bhatia K, Aka P, et al. Relationship between Plasmodium falciparum malaria prevalence, genetic diversity and endemic Burkitt lymphoma in Malawi. Scientific Reports. 2014; 4.

Mutabazi-Mwesigire D, Seeley J, Martin F, Katamba A. Perceptions of quality of life among Ugandan patients living with HIV: a qualitative study. BMC Public Health. 2014; 14(1): 343.

Vandepitte J, Weiss HA, Bukenya J, Kyakuwa N, Muller E, Buve A, et al. Association between Mycoplasma genitalium infection and HIV acquisition among female sex workers in Uganda: evidence from a nested case-control study. Sexually  Transmitted Infections. 2014; 31(10): 2013-051467.

Phillips AN, Munderi P, Revill PA, El-Sadr WM, Lundgren JD. Antiretroviral therapy recommendations for the global community: aspiration versus reality. AIDS. 2014; 28(7): 939-41. doi: 10.1097/QAD.0000000000000171

Tann CJ, Nkurunziza P, Nakakeeto M, Oweka J, Kurinczuk JJ, Were J, et al. Prevalence of Bloodstream Pathogens Is Higher in Neonatal Encephalopathy Cases vs. Controls Using a Novel Panel of Real-Time PCR Assays. PloS One. 2014; 9(5): e97259.

Muhwezi W, Kinyanda E, Mungherera M, Onyango P, Ngabirano E, Muron J, et al. Coping Amidst Life Adversity in Post-Conflict Societies: Qualitative Revelations from Communities in Eastern Uganda. Journal of Traumatic Stress Disorders and Treatment 3. 2014; 2: 2

Crook AM, Ford D, Gafos M, Hayes R, Kamali A, Kapiga S, et al. Injectable and oral contraceptives and risk of HIV acquisition in women: an analysis of data from the MDP301 trial. Human Reproduction. 2014: deu113.

Slaymaker E, Todd J, Marston M, Calvert C, Michael D, Nakiyingi-Miiro J, et al. How have ART treatment programmes changed the patterns of excess mortality in people living with HIV? Estimates from four countries in East and Southern Africa. Global Health Action. 2014; 7

Rob Newton: Contributor in World Cancer Report 2014

 Mugaba S, Nakiboneka R, Nanyonjo M, Bugembe-Lule D, Kaddu I, Nanteza B, et al. Group M consensus Gag and Nef peptides are as efficient at detecting clade A1 and D cross-subtype T-cell functions as subtype-specific consensus peptides. Vaccine. 2014 Jun 24;32(30):3787-95

Mpairwe H, Tweyongyere R, Elliott A. Pregnancy and helminth infections. Parasite Immunology. 2014.

Nakimuli A, Chazara O, Byamugisha J, Elliott AM, Kaleebu P, Mirembe F, et al. Pregnancy, parturition and preeclampsia in women of African ancestry. American Journal of Obstetrics and Gynecology. 2014; 210(6): 510-20. e1

de Moira AP, Fitzsimmons CM, Jones FM, Wilson S, Cahen P, Tukahebwa E, et al. Suppression of Basophil Histamine Release and Other IgE-dependent Responses in Childhood Schistosoma mansoni/hookworm Coinfection. Journal of Infectious Diseases. 2014: jiu234

Muyanja E, Ssemaganda A, NGauv P, Cubas R, Perrin H, Srinivasan D, et al. Immune activation alters cellular and humoral responses to yellow fever 17D vaccine. The Journal of Clinical Investigation. 2014; 124(124 (7)): 0-.

 Parry C, Parkin N, Diallo K, Mwebaza S, Batamwita R, DeVos J, et al. Field Study of Dried Blood Spot Specimens for HIV-1 Drug Resistance Genotyping. Journal of Clinical Microbiology. 2014: JCM. 00544-14.

 Kiwanuka N, Ssetaala A, Nalutaaya A, Mpendo J, Wambuzi M, Nanvubya A, et al. High Incidence of HIV-1 Infection in a General Population of Fishing Communities around Lake Victoria, Uganda. PloS One. 2014; 9(5): e94932.

Voronin Y, Mofenson LM, Cunningham CK, Fowler MG, Kaleebu P, McFarland EJ, et al. HIV Monoclonal Antibodies: A New Opportunity to Further Reduce Mother-to-Child HIV Transmission. PLoS Medicine. 2014; 11(4): e1001616.

 Goodall R, Dunn D, Pattery T, van Cauwenberge A, Nkurunziza P, Awio P, et al. Phenotypic and genotypic analyses to guide selection of reverse transcriptase inhibitors in second-line HIV therapy following extended virological failure in Uganda. Journal of Antimicrobial Chemotherapy. 2014: dku052.

Kityo C, Gibb DM, Gilks CF, Goodall RL, Mambule I, Kaleebu P, et al. High Level of Viral Suppression and Low Switch Rate to Second-Line Antiretroviral Therapy among HIV-Infected Adult Patients Followed over Five Years: Retrospective Analysis of the DART Trial. PloS One. 2014; 9(3): e90772.

 Pinot de Moira A., Fitzsimmons C. M., Jones F. M., Wilson S. W., Cahen P., Tukahebwa E., Mpairwe H., Mwatha J. K., Bethony J. M., Skov P. S., Kabatereine N. B., and Dunne D. W. (2014). "Suppression of Basophil Histamine Release and Other IgE-dependent Responses in Childhood Schistosoma mansoni/hookworm Coinfection." Journal of Infectious Diseases.(Ahead of print)

 Mbonye M, Rutakumwa R, Weiss H, Seeley J. Alcohol consumption and high risk sexual behaviour among female sex workers in Uganda. African Journal of AIDS Research. 2014; 13(2): 145-51.

 Kawuma, R., S. Bernays, G. E. Siu, T. Rhodes and J. Seeley (2014). "`Children will always be children': exploring perceptions and experiences of children living with HIV who may not take their treatment and why they may not tell." African Journal of AIDS Research

 Adrienne K Chan, Deborah Ford, Harriet Namata, Margaret Muzambi, Misheck J Nkhata,George Abongomera, Ivan Mambule, Annabelle South, Paul Revill, Caroline Grundy,Travor Mabugu, Levison Chiwaula, Fabian Cataldo, James Hakim, Janet Seeley, Cissy Kityo, Andrew Reid, Elly Katabira, Sumeet Sodhi, Charles F Gilks and Diana M Gibb. The Lablite project: A cross-sectional mapping survey of decentralized HIV service provision in Malawi, Uganda and Zimbabwe. BMC Health Services Research 2014, 14:352  doi:10.1186/1472-6963-14-352

Carr, Daniel; Chaponda, Masautso; Cornejo Castro, Elena; Jorgensen, Andrea; Khoo, Saye Khoo; van Oosterhout, Joep; Dandara, Collet; Kampira, Elizabeth; Ssali, Francis; Munderi, Paula; Lalloo, David; Heyderman, Robert; Pirmohamed, Munir Cyp2b6 C.983t>C Polymorphism Is Associated With Nevirapine Hypersensitivity In  Malawian And Ugandan HIV Populations. Journal of Antimicrobial Chemotherapy (2014) doi:10.1093/jac/dku315

Mugisha JO, Baisely K, Seeley J, Kuper H. The impact of anaemia on functioning in older people in a rural population in South West Uganda. British Journal of Haematology. 2014. DOI: 10.1111/bjh.13018

 Redd AD, Ssemwanga D, Vandepitte J, Wendel SK, Ndembi N, Bukenya J, et al. Rates of HIV-1 superinfection and primary HIV-1 infection are similar in female sex workers in Uganda. AIDS. 2014; 500: 14-00349.

 Millard JD, Muhangi L, Sewankambo M, Ndibazza J, Elliott AM, Webb EL. Assessing the external validity of a randomized controlled trial of anthelmintics in mothers and their children in Entebbe, Uganda. Trials. 2014; 15(1): 310.

 Kuteesa MO, Wright S, Seeley J, Mugisha J, Kinyanda E, Kakembo F, et al. Experiences of HIV-related stigma among HIV-positive older persons in Uganda–a mixed methods analysis. SAHARA-J:. 2014; (ahead-of-print): 1-12.

 Ruzagira E, Abaasa A, Karita E, Mulenga J, Kilembe W, Allen S, et al. Effect of Seasonal Variation on Adult Clinical Laboratory Parameters in Rwanda, Zambia, and Uganda: Implications for HIV Biomedical Prevention Trials. PloS One. 2014; 9(8): e105089.

 Riha J, Karabarinde A, Ssenyomo G, Allender S, Asiki G, Kamali A, et al. Urbanicity and Lifestyle Risk Factors for Cardiometabolic Diseases in Rural Uganda: A Cross-Sectional Study. PLoS Medicine. 2014; 11(7): e1001683.

 Sebina I, Biraro IA, Dockrell HM, Elliott AM, Cose S. Circulating B-Lymphocytes as Potential Biomarkers of Tuberculosis Infection Activity. PloS One. 2014; 9(9): e106796.

Martin, F., Russell, S., & Seeley, J. (2014). Higher Quality of Life and Lower Depression for People on ART in Uganda as Compared to a Community Control Group. PloS One9(8), e105154.

Waddell, K. M., Kagame, K., Ndamira, A., Twinamasiko, A., Picton, S. V., Simmons, I. G., Johnston, W. T. & Newton, R. 2014. Clinical features and survival among children with retinoblastoma in Uganda. British Journal of Ophthalmology, bjophthalmol-2014-305564.

 Baxi SM, Liu A, Bacchetti P, Mutua G, Sanders EJ, Kibengo FM, Haberer JE, Rooney J, Hendrix CW & Anderson PL. Comparing the Novel Method of Assessing PrEP Adherence/Exposure using Hair Samples to other Pharmacologic and Traditional Measures. Journal of Acquired Immune Deficiency Syndromes (1999). 2014.

Mpairwe H, Ndibazza J, Webb EL, Nampijja M, Muhangi L, Apule B, Lule S, Akurut H, Kizito D, Kakande M, Jones FM, Fitzsimmons CM, Muwanga M, Rodrigues LC, Dunne DW, Elliott AM. Maternal hookworm modifies the risk factors for eczema in childhood: birth cohort in Uganda.  Pediatric Allergy and Immunology 2014, 25(5):481-8. 

Adebamowo C, Bah-Sow O, Binka F, Bruzzone R, Caplan A, Delfraissy JF, Heymann D, Horby P, Kaleebu P, Muyembe Tamfum JJ, Olliaro P, Piot P, Tejan-Cole A, Tomori O, Toure A, Torreele E, Whitehead J. Randomised controlled trials for Ebola: practical and ethical issues; The Lancet. 2014; 384(9952):1423 – 1424   

Panoutsopoulou K, Hatzikotoulas K, Xifara DK, Colonna V, Farmaki AE, Ritchie GR, Southam L, Gilly A, Tachmazidou I, Fatumo S, Matchan A, Rayner NW, Ntalla I, Mezzavilla M, Chen Y, Kiagiadaki C, Zengini E, Mamakou V, Athanasiadis A, Giannakopoulou M, Kariakli VE, Nsubuga RN, Karabarinde A, Sandhu M, McVean G, Tyler-Smith C, Tsafantakis E, Karaleftheri M, Xue Y, Dedoussis G, Zeggini E. Genetic characterization of Greek population isolates reveals strong genetic drift at missense and trait-associated variants. Nature Communications. 2014; 5:5345. doi: 10.1038/ncomms6345.

Kaleebu P, Kamali A, Seeley J, Elliott A, & Katongole‐Mbidde E.  The Medical Research Council (UK)/Uganda Virus Research Institute Uganda Research Unit on AIDS–‘25 years of research through partnerships’. Tropical Medicine & International Health. 2014

Kasedde S, Doyle AM, Seeley JA, Ross DA. They are not always a burden: Older people and child fostering in Uganda during the HIV epidemic. Social Science & Medicine. 2014; 113: 161-8.

 Mpairwe H, Ndibazza J, Webb EL, Nampijja M, Muhangi L, Apule B, Lule S, Akurut H, Kizito D & Kakande M. Maternal hookworm modifies risk factors for childhood eczema: results from a birth cohort in Uganda. Pediatric Allergy and Immunology. 2014; 25(5): 481-8.

 Biraro IA, Egesa M, Toulza F, Levin J, Cose S, Joloba M, Smith S, Dockrell HM, Katamba A & Elliott AM. Impact of Co-Infections and BCG Immunisation on Immune Responses among Household Contacts of Tuberculosis Patients in a Ugandan Cohort. PloS One. 2014; 9(11): e111517.

 Baxi SM, Liu A, Bacchetti P, Mutua G, Sanders EJ, Kibengo FM, Haberer JE, Rooney J, Hendrix CW & Anderson PL. Comparing the Novel Method of Assessing PrEP Adherence/Exposure using Hair Samples to other Pharmacologic and Traditional Measures. Journal of Acquired Immune Deficiency Syndromes (1999). 2014

 

 Nakamanya S, Siu GE, Lassman R, Seeley J, Tann CJ. Maternal experiences of caring for an infant with neurological impairment after neonatal encephalopathy in Uganda: a qualitative study. Disability & Rehabilitation. 2014; (0): 1-7

Stover J, Andreev K, Slaymaker E, Gopalappa C, Sabin K, Velasquez C, Nakiyingi-Miiro J, Crampin A, Lutalo T & Herbst K. Updates to the Spectrum model to estimate key HIV indicators for adults and children. AIDS. 2014.28, S427-S434

 

Kiwuwa-Muyingo S, Kikaire B, Mambule I, Musana H, Musoro G, Gilks CF, Levin JB & Walker AS. Prevalence, incidence and predictors of peripheral neuropathy in African adults with HIV infection within the DART trial. AIDS. 2014; 28(17): 2579-88

Reniers G, Slaymaker E, Nakiyingi-Miiro J, Nyamukapa C, Crampin AC, Herbst K, Urassa M, Otieno F, Gregson S, Sewe M, Michael D, Lutalo T, Hosegood V, Kasamba I, Price A, Nabukalu D, Mclean E, Zaba B. Mortality trends in the era of antiretroviral therapy: evidence from the Network for Analysing Longitudinal Population based HIV/AIDS data on Africa (ALPHA). AIDS. 2014; 28: S533-S42.


Kigozi G, Musoke R, Kighoma N; et al. Safety of medical male circumcision in human immunodeficiency virus-infected men in Rakia, Uganda. Urology. 2014 Feb;83(2):294-7. doi: 10.1016/j.urology.2013.08.038. Epub 2013 Nov 26.

Prentice HA, Price MA, Porter TR, et al. (2014) Dynamics of viremia in primary HIV-1 infection in Africans: insights from analyses of host and viral correlates. Virology. 2014 Jan 20;449:254-62. doi: 10.1016/j.virol.2013.11.024. Epub 2013 Dec 12.

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